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Aggregate data from AMRfinder This is a thin wrapper around BascetAggregateMap

Usage

BascetAggregateAMRfinder(
  bascetRoot,
  inputName = "AMRfinder",
  includeCells = NULL,
  getColumn = "Element.symbol",
  ...
)

Arguments

bascetRoot

The root folder where all Bascets are stored

inputName

Name of input shard

includeCells

Character vector of cell names to include, or NULL for all cells

getColumn

Column name from AMRfinder output to use as feature (string)

...

Additional arguments passed to BascetAggregateMap

Value

Aggregated data