Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Usage

BascetComputeMinhash(
  bascetRoot,
  inputName = "filtered",
  outputName = "minhash",
  maxReads = 1e+05,
  kmerSize = 31,
  ...
)

Arguments

bascetRoot

The root folder where all Bascets are stored

inputName

Name of input shard

outputName

Name of output shard

maxReads

The maximum number of reads per cell to sample

kmerSize

The KMER size for the hashing

...

Additional arguments passed to BascetMapCell

Value

A job to be executed, or being executed, depending on runner settings

See also

BascetMapCell