Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Usage

BascetComputeMinhash(
  bascetRoot,
  inputName = "filtered",
  outputName = "minhash",
  overwrite = FALSE,
  maxReads = 1e+05,
  kmerSize = 31,
  runner = GetDefaultBascetRunner(),
  bascetInstance = GetDefaultBascetInstance()
)

Arguments

bascetRoot

The root folder where all Bascets are stored

runner

The job manager, specifying how the command will be run (e.g. locally, or via SLURM)

bascetInstance

Configuration for how to run the Bascet Rust API

Value

TODO