Prepare to shard reads by collecting statistics about each barcode, and filtering out cells with few reads

Prepare to shard reads by collecting statistics about each barcode, and filtering out cells with few reads

Usage

PrepareSharding(
  bascetRoot,
  inputName,
  minQuantile = 0.9,
  bascetInstance = GetDefaultBascetInstance(),
  verbose = TRUE
)

Arguments

minQuantile

Read count-based cutoff for inclusion in final shards

bascetInstance

A Bascet instance

Value

Statistics about the debarcoded reads