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Callback function for aggregating ABRicate data for each cell. To be called from BascetAggregateMap

Source: R/ext_tools.R
aggr.amrfinder.Rd

Callback function for aggregating ABRicate data for each cell. To be called from BascetAggregateMap

Usage

aggr.amrfinder(bascetFile, cellID, bascetInstance)

Arguments

bascetFile

An opened Bascet file

cellID

Cell ID

bascetInstance

A Bascet instance

Value

Data for one cell